STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBXN4UBX domain protein 4. (507 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.995
UBXN6
UBX domain protein 6.
    
 0.995
UBXN1
UBX domain protein 1.
     
 0.951
UBXN8
UBX domain protein 8.
   
 
 0.939
NSFL1C
NSFL1 cofactor.
    
 0.929
SVIP
Uncharacterized protein.
     
 0.889
UBE4A
Ubiquitination factor E4A.
    
 
 0.866
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 0.837
FGF2
Spermatogenesis associated 5.
   
 0.837
IP6K1
Kinase; Belongs to the inositol phosphokinase (IPK) family.
    
   0.835
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.