LOC102156375 protein (Canis lupus familiaris)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC102156375

Cystatin domain-containing protein. (140 aa)

Predicted Functional Partners:

CSTA

0.537

CTSB

0.523

AHSG

0.510

CSTB

0.488

SPP2

0.464

CST11

0.454

CST6

0.433

LCN8

0.432

LCN9

0.416

CTSS

0.414

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHSG	LOC102156375	ENSCAFP00000019983	ENSCAFP00000007623	Alpha 2-HS glycoprotein.	Cystatin domain-containing protein.	0.510
AHSG	SPP2	ENSCAFP00000019983	ENSCAFP00000017648	Alpha 2-HS glycoprotein.	Secreted phosphoprotein 2.	0.693
CST11	LCN8	ENSCAFP00000007628	ENSCAFP00000045625	Cystatin 11.	Lipocalin 15; Belongs to the calycin superfamily. Lipocalin family.	0.855
CST11	LCN9	ENSCAFP00000007628	ENSCAFP00000029236	Cystatin 11.	Lipocalin 9; Belongs to the calycin superfamily. Lipocalin family.	0.826
CST11	LOC102156375	ENSCAFP00000007628	ENSCAFP00000007623	Cystatin 11.	Cystatin domain-containing protein.	0.454
CST6	CTSB	ENSCAFP00000019260	ENSCAFP00000059573	Cystatin E/M; Belongs to the cystatin family.	Cathepsin B; Belongs to the peptidase C1 family.	0.412
CST6	LOC102156375	ENSCAFP00000019260	ENSCAFP00000007623	Cystatin E/M; Belongs to the cystatin family.	Cystatin domain-containing protein.	0.433
CST6	SPP2	ENSCAFP00000019260	ENSCAFP00000017648	Cystatin E/M; Belongs to the cystatin family.	Secreted phosphoprotein 2.	0.481
CSTA	CTSB	ENSCAFP00000017483	ENSCAFP00000059573	Cystatin A; Belongs to the cystatin family.	Cathepsin B; Belongs to the peptidase C1 family.	0.967
CSTA	CTSS	ENSCAFP00000017483	ENSCAFP00000017782	Cystatin A; Belongs to the cystatin family.	Cathepsin S; Thiol protease. Key protease responsible for the removal of the invariant chain from MHC class II molecules. The bond-specificity of this proteinase is in part similar to the specificities of cathepsin L (By similarity).	0.671
CSTA	LOC102156375	ENSCAFP00000017483	ENSCAFP00000007623	Cystatin A; Belongs to the cystatin family.	Cystatin domain-containing protein.	0.537
CSTB	CTSB	ENSCAFP00000048425	ENSCAFP00000059573	Cystatin B.	Cathepsin B; Belongs to the peptidase C1 family.	0.604
CSTB	LOC102156375	ENSCAFP00000048425	ENSCAFP00000007623	Cystatin B.	Cystatin domain-containing protein.	0.488
CTSB	CST6	ENSCAFP00000059573	ENSCAFP00000019260	Cathepsin B; Belongs to the peptidase C1 family.	Cystatin E/M; Belongs to the cystatin family.	0.412
CTSB	CSTA	ENSCAFP00000059573	ENSCAFP00000017483	Cathepsin B; Belongs to the peptidase C1 family.	Cystatin A; Belongs to the cystatin family.	0.967
CTSB	CSTB	ENSCAFP00000059573	ENSCAFP00000048425	Cathepsin B; Belongs to the peptidase C1 family.	Cystatin B.	0.604
CTSB	CTSS	ENSCAFP00000059573	ENSCAFP00000017782	Cathepsin B; Belongs to the peptidase C1 family.	Cathepsin S; Thiol protease. Key protease responsible for the removal of the invariant chain from MHC class II molecules. The bond-specificity of this proteinase is in part similar to the specificities of cathepsin L (By similarity).	0.761
CTSB	LOC102156375	ENSCAFP00000059573	ENSCAFP00000007623	Cathepsin B; Belongs to the peptidase C1 family.	Cystatin domain-containing protein.	0.523
CTSS	CSTA	ENSCAFP00000017782	ENSCAFP00000017483	Cathepsin S; Thiol protease. Key protease responsible for the removal of the invariant chain from MHC class II molecules. The bond-specificity of this proteinase is in part similar to the specificities of cathepsin L (By similarity).	Cystatin A; Belongs to the cystatin family.	0.671
CTSS	CTSB	ENSCAFP00000017782	ENSCAFP00000059573	Cathepsin S; Thiol protease. Key protease responsible for the removal of the invariant chain from MHC class II molecules. The bond-specificity of this proteinase is in part similar to the specificities of cathepsin L (By similarity).	Cathepsin B; Belongs to the peptidase C1 family.	0.761