STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFMBT2Scm like with four mbt domains 2. (894 aa)    
Predicted Functional Partners:
SLC38A4
Solute carrier family 38 member 4.
      
 0.900
SFMBT1
Scm like with four mbt domains 1.
   
 
  0.886
SMOC1
SPARC related modular calcium binding 1.
      
 0.855
JADE1
Jade family PHD finger 1.
      
 0.812
GATM
Uncharacterized protein.
    
 
 0.617
HMG20A
High mobility group 20A.
   
 
 0.603
H1FOO
Uncharacterized protein.
    
 
 0.600
MBD3
Methyl-CpG binding domain protein 3.
    
 
 0.596
RASGRF1
Ras protein specific guanine nucleotide releasing factor 1.
      
 0.589
UBE2O
Ubiquitin conjugating enzyme E2 O.
   
 
 0.560
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.