STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHKBP1SH3KBP1 binding protein 1. (727 aa)    
Predicted Functional Partners:
KCTD3
Potassium channel tetramerization domain containing 3.
  
 
 
0.954
CUL3
Cullin 3; Belongs to the cullin family.
    
 
 0.871
BTBD10
BTB domain containing 10.
      
 0.864
KCTD19
Potassium channel tetramerization domain containing 19.
    
 
 0.840
PACRGL
Parkin coregulated like.
      
 0.832
SH3KBP1
SH3 domain containing kinase binding protein 1.
    
 
 0.805
TNFAIP3
TNF alpha induced protein 3.
    
   0.802
SNX27
Sorting nexin 27.
    
   0.768
PUS3
Pseudouridine synthase 3.
      
 0.692
MTM1
Myotubularin 1.
      
 0.692
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.