STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHKBP1SH3KBP1 binding protein 1. (727 aa)    
Predicted Functional Partners:
PACRGL
Parkin coregulated like.
      
 0.841
BTBD10
BTB domain containing 10.
      
 0.825
KCTD19
Potassium channel tetramerization domain containing 19.
   
 
 0.820
KCTD1
Potassium channel tetramerization domain containing 1.
    
 
0.578
ZNF609
Zinc finger protein 609.
   
  
 0.575
PLEKHG4
Pleckstrin homology and RhoGEF domain containing G4.
      
 0.568
LRRC23
Leucine rich repeat containing 23.
    
 
 0.529
TTBK2
Tau tubulin kinase 2.
   
  
 0.515
TNFAIP1
TNF alpha induced protein 1.
      
0.514
MACC1
MET transcriptional regulator MACC1.
      
 0.506
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.