STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAX1Paired box 1. (448 aa)    
Predicted Functional Partners:
HOXA3
Homeobox A3.
   
 
 0.801
FOXN1
Forkhead box N1.
   
  
 0.712
GCM2
Glial cells missing transcription factor 2.
   
  
 0.673
MEOX1
Mesenchyme homeobox 1.
   
 
 0.666
FOXF1
Forkhead box F1.
   
  
 0.642
CA12
Carbonic anhydrase 12; Belongs to the alpha-carbonic anhydrase family.
      
 0.609
SOX6
SRY-box 6.
      
 0.526
LMO2
LIM domain only 2.
      
 0.523
TCF15
Transcription factor 15.
   
  
 0.520
SCX
Scleraxis bHLH transcription factor.
      
 0.515
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.