STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBM17RNA binding motif protein 17. (401 aa)    
Predicted Functional Partners:
U2SURP
U2 snRNP associated SURP domain containing.
   
 0.994
CHERP
Calcium homeostasis endoplasmic reticulum protein.
   
 0.991
SF3A2
Splicing factor 3a subunit 2.
    
 0.982
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.969
SUGP1
SURP and G-patch domain containing 1.
   
 
 0.968
DHX15
DEAH-box helicase 15.
   
 
 0.963
SF3B1
Splicing factor 3b subunit 1.
   
 
 0.961
SF3A1
Splicing factor 3a subunit 1.
   
 0.957
SF3A3
Matrin-type domain-containing protein.
   
 0.945
SF3B4
Splicing factor 3b subunit 4.
    
 0.935
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.