STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GVQW3GVQW motif containing 3. (208 aa)    
Predicted Functional Partners:
CDYL
Chromodomain Y like.
   
 
 0.655
CDYL2
Chromodomain Y like 2.
   
 
 0.655
APPL2
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2.
    
   0.565
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
   0.565
DDB1
Damage specific DNA binding protein 1.
    
 
 0.513
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 0.501
PRDM4
PR domain zinc finger protein 4; May function as a transcription factor involved in cell differentiation.
   
 0.454
PRDM5
Zinc finger protein.
   
 0.454
MPHOSPH8
Uncharacterized protein.
    
 0.441
KDM6A
Lysine demethylase 6A.
   
 
 0.431
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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