STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGR2MARVEL domain-containing protein. (284 aa)    
Predicted Functional Partners:
TMC8
Transmembrane channel-like protein.
 
    
 0.835
STX10
Syntaxin 10; Belongs to the syntaxin family.
      
 0.689
TMC6
Transmembrane channel-like protein.
   
  
 0.609
STX18
Syntaxin 18.
      
 0.609
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
      
 0.599
NR5A2
Nuclear receptor subfamily 5 group A member 2.
      
 0.518
FATE1
Fetal and adult testis expressed 1.
    
   0.468
MOK
MOK protein kinase; Belongs to the protein kinase superfamily.
   
    0.441
MAK
Male germ cell associated kinase.
   
    0.441
CILK1
Intestinal cell kinase.
   
    0.441
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.