CRNKL1 protein (Canis lupus familiaris) - STRING interaction network

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Score

CRNKL1

Crooked neck pre-mRNA splicing factor 1. (728 aa)

Predicted Functional Partners:

XAB2

0.999

PRPF19

0.997

LOC478183

0.996

SYF2

0.996

CDC5L

0.993

CCDC12

0.992

AQR

0.991

EFTUD2

0.990

RBM22

0.990

PLRG1

0.988

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQR	CCDC12	ENSCAFP00000012323	ENSCAFP00000049767	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Coiled-coil domain containing 12.	0.851
AQR	CDC5L	ENSCAFP00000012323	ENSCAFP00000002938	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Cell division cycle 5 like.	0.916
AQR	CRNKL1	ENSCAFP00000012323	ENSCAFP00000007969	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Crooked neck pre-mRNA splicing factor 1.	0.991
AQR	EFTUD2	ENSCAFP00000012323	ENSCAFP00000020765	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Elongation factor Tu GTP binding domain containing 2.	0.937
AQR	LOC478183	ENSCAFP00000012323	ENSCAFP00000019001	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Uncharacterized protein.	0.818
AQR	PLRG1	ENSCAFP00000012323	ENSCAFP00000012356	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Pleiotropic regulator 1.	0.960
AQR	PRPF19	ENSCAFP00000012323	ENSCAFP00000044990	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Pre-mRNA processing factor 19.	0.988
AQR	RBM22	ENSCAFP00000012323	ENSCAFP00000026732	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	RNA binding motif protein 22.	0.987
AQR	SYF2	ENSCAFP00000012323	ENSCAFP00000031315	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Uncharacterized protein.	0.818
AQR	XAB2	ENSCAFP00000012323	ENSCAFP00000042813	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	XPA binding protein 2.	0.991
CCDC12	AQR	ENSCAFP00000049767	ENSCAFP00000012323	Coiled-coil domain containing 12.	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	0.851
CCDC12	CDC5L	ENSCAFP00000049767	ENSCAFP00000002938	Coiled-coil domain containing 12.	Cell division cycle 5 like.	0.784
CCDC12	CRNKL1	ENSCAFP00000049767	ENSCAFP00000007969	Coiled-coil domain containing 12.	Crooked neck pre-mRNA splicing factor 1.	0.992
CCDC12	EFTUD2	ENSCAFP00000049767	ENSCAFP00000020765	Coiled-coil domain containing 12.	Elongation factor Tu GTP binding domain containing 2.	0.771
CCDC12	LOC478183	ENSCAFP00000049767	ENSCAFP00000019001	Coiled-coil domain containing 12.	Uncharacterized protein.	0.977
CCDC12	PLRG1	ENSCAFP00000049767	ENSCAFP00000012356	Coiled-coil domain containing 12.	Pleiotropic regulator 1.	0.768
CCDC12	PRPF19	ENSCAFP00000049767	ENSCAFP00000044990	Coiled-coil domain containing 12.	Pre-mRNA processing factor 19.	0.827
CCDC12	RBM22	ENSCAFP00000049767	ENSCAFP00000026732	Coiled-coil domain containing 12.	RNA binding motif protein 22.	0.768
CCDC12	SYF2	ENSCAFP00000049767	ENSCAFP00000031315	Coiled-coil domain containing 12.	Uncharacterized protein.	0.977
CCDC12	XAB2	ENSCAFP00000049767	ENSCAFP00000042813	Coiled-coil domain containing 12.	XPA binding protein 2.	0.977