STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPNE9Copine family member 9. (553 aa)    
Predicted Functional Partners:
ELAVL2
ELAV-like protein; Belongs to the RRM elav family.
   
  
 0.526
SCN3B
Sodium voltage-gated channel beta subunit 3.
   
  
 0.526
PDE1B
Phosphodiesterase.
      
 0.519
TDRP
Testis development related protein.
      
 0.515
ZNF296
Zinc finger protein 296.
      
 0.503
RNASEH2B
Ribonuclease H2 subunit B.
   
 
 0.491
NHLH2
Nescient helix-loop-helix 2.
   
  
 0.477
TAFA1
TAFA chemokine like family member 1.
   
  
 0.458
CHD4
Chromodomain helicase DNA binding protein 4.
    
 
 0.455
RNASEH2A
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.419
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.