STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SGSHN-sulfoglucosamine sulfohydrolase. (507 aa)    
Predicted Functional Partners:
HGSNAT
Heparan-alpha-glucosaminide N-acetyltransferase.
   
 
 0.972
SUMF1
Sulfatase modifying factor 1.
  
 0.960
IDUA
Alpha-L-iduronidase.
   
 0.960
NAGLU
N-acetyl-alpha-glucosaminidase.
   
  
 0.941
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
      
 0.738
MANBA
Mannosidase beta.
   
 0.716
ARSA
Arylsulfatase A.
  
0.688
CLCN6
Chloride channel protein.
   
  
 0.676
CLN5
Ceroid-lipofuscinosis neuronal protein 5, secreted form; Plays a role in influencing the retrograde trafficking of lysosomal sorting receptors SORT1 and IGF2R from the endosomes to the trans-Golgi network by controlling the recruitment of retromer complex to the endosomal membrane. Regulates the localization and activation of RAB7A which is required to recruit the retromer complex to the endosomal membrane; Belongs to the CLN5 family.
   
 
 0.648
IDS
Iduronate 2-sulfatase.
  
 
 
0.644
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (24%) [HD]