NMI protein (Canis lupus familiaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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[Homology]

Score

NMI

N-myc and STAT interactor. (308 aa)

Predicted Functional Partners:

IFI35

0.983

BRMS1

0.785

ENSCAFP00000056794

0.785

F6Y518_CANLF

0.657

MRPS35

0.657

RPL27

0.608

E2QVG7_CANLF

0.608

TRIM58

0.607

TNPO3

0.585

ASRGL1

0.578

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Export your current network:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASRGL1	NMI	ENSCAFP00000023340	ENSCAFP00000008441	Asparaginase like 1.	N-myc and STAT interactor.	0.578
BRMS1	ENSCAFP00000056794	ENSCAFP00000018831	ENSCAFP00000056794	BRMS1 transcriptional repressor and anoikis regulator.	Uncharacterized protein.	0.901
BRMS1	NMI	ENSCAFP00000018831	ENSCAFP00000008441	BRMS1 transcriptional repressor and anoikis regulator.	N-myc and STAT interactor.	0.785
E2QVG7_CANLF	NMI	ENSCAFP00000034946	ENSCAFP00000008441	Uncharacterized protein.	N-myc and STAT interactor.	0.608
ENSCAFP00000056794	BRMS1	ENSCAFP00000056794	ENSCAFP00000018831	Uncharacterized protein.	BRMS1 transcriptional repressor and anoikis regulator.	0.901
ENSCAFP00000056794	NMI	ENSCAFP00000056794	ENSCAFP00000008441	Uncharacterized protein.	N-myc and STAT interactor.	0.785
F6Y518_CANLF	IFI35	ENSCAFP00000009800	ENSCAFP00000034705	IRF-3 domain-containing protein.	Interferon induced protein 35.	0.810
F6Y518_CANLF	NMI	ENSCAFP00000009800	ENSCAFP00000008441	IRF-3 domain-containing protein.	N-myc and STAT interactor.	0.657
F6Y518_CANLF	TRIM58	ENSCAFP00000009800	ENSCAFP00000001759	IRF-3 domain-containing protein.	Tripartite motif containing 58.	0.769
IFI35	F6Y518_CANLF	ENSCAFP00000034705	ENSCAFP00000009800	Interferon induced protein 35.	IRF-3 domain-containing protein.	0.810
IFI35	NMI	ENSCAFP00000034705	ENSCAFP00000008441	Interferon induced protein 35.	N-myc and STAT interactor.	0.983
IFI35	TRIM58	ENSCAFP00000034705	ENSCAFP00000001759	Interferon induced protein 35.	Tripartite motif containing 58.	0.524
MRPS35	NMI	ENSCAFP00000016172	ENSCAFP00000008441	Mitochondrial ribosomal protein S35.	N-myc and STAT interactor.	0.657
NMI	ASRGL1	ENSCAFP00000008441	ENSCAFP00000023340	N-myc and STAT interactor.	Asparaginase like 1.	0.578
NMI	BRMS1	ENSCAFP00000008441	ENSCAFP00000018831	N-myc and STAT interactor.	BRMS1 transcriptional repressor and anoikis regulator.	0.785
NMI	E2QVG7_CANLF	ENSCAFP00000008441	ENSCAFP00000034946	N-myc and STAT interactor.	Uncharacterized protein.	0.608
NMI	ENSCAFP00000056794	ENSCAFP00000008441	ENSCAFP00000056794	N-myc and STAT interactor.	Uncharacterized protein.	0.785
NMI	F6Y518_CANLF	ENSCAFP00000008441	ENSCAFP00000009800	N-myc and STAT interactor.	IRF-3 domain-containing protein.	0.657
NMI	IFI35	ENSCAFP00000008441	ENSCAFP00000034705	N-myc and STAT interactor.	Interferon induced protein 35.	0.983
NMI	MRPS35	ENSCAFP00000008441	ENSCAFP00000016172	N-myc and STAT interactor.	Mitochondrial ribosomal protein S35.	0.657