STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEP131Centrosomal protein 131. (1000 aa)    
Predicted Functional Partners:
PCM1
Pericentriolar material 1.
   
 
 0.979
CEP290
Centrosomal protein 290.
   
 0.854
CEP72
Centrosomal protein 72.
    
 
 0.832
NIN
Ninein.
   
 
 0.828
OFD1
OFD1 centriole and centriolar satellite protein.
    
 0.828
PCNT
Pericentrin.
   
 0.691
BBS4
Ariadne RBR E3 ubiquitin protein ligase 1.
    
 0.666
CCDC66
Coiled-coil domain-containing protein 66; Microtubule-binding protein required for ciliogenesis. May function in ciliogenesis by mediating the transport of proteins like BBS4 to the cilium, but also through the organization of the centriolar satellites (By similarity). Plays a role in retina morphogenesis and/or homeostasis.
    
 
 0.646
ZNF598
Zinc finger protein 598.
   
 
 0.583
PDZD4
PDZ domain containing 4.
    
 
 0.556
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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