STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPLOC4NPL4 homolog, ubiquitin recognition factor. (615 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.998
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
   
 0.998
UBXN7
UBX domain-containing protein 7.
   
 0.993
FANCM
FA complementation group M.
   
 
 0.975
UBAC2
UBA domain containing 2.
   
 
 0.962
FAF2
Fas associated factor family member 2.
   
 
 0.954
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
   
 
 0.952
VCPIP1
Valosin containing protein interacting protein 1.
   
 
 0.948
NSFL1C
NSFL1 cofactor.
    
 
 0.945
UBXN10
UBX domain protein 10.
    
 
 0.942
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.