STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC483364Tetraspanin. (527 aa)    
Predicted Functional Partners:
CD81
Tetraspanin.
      
 0.618
SLC16A8
Solute carrier family 16 member 8.
      
 0.571
HSD17B11
Hydroxysteroid 17-beta dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
   0.565
RDH5
Retinol dehydrogenase 5; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.497
CELF5
CUGBP Elav-like family member 5.
      
 0.488
CD9
Tetraspanin.
      
 0.484
ENSCAFP00000062613
Uncharacterized protein.
      
 0.484
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
      
 0.476
RETSAT
Retinol saturase.
      
 0.476
TSPAN32
Tetraspanin 32; Belongs to the tetraspanin (TM4SF) family.
      
 0.473
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.