STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA1Steroid receptor RNA activator 1. (237 aa)    
Predicted Functional Partners:
PUS1
Pseudouridine synthase 1.
      
 0.806
DCP1A
Decapping mRNA 1A.
      
 0.719
SEC24C
SEC24 homolog C, COPII coat complex component.
    
   0.703
SEC24D
SEC24 homolog D, COPII coat complex component.
    
   0.688
PUS10
Pseudouridine synthase 10.
      
 0.652
SEC24A
SEC24 homolog A, COPII coat complex component.
    
   0.632
TMEM245
Transmembrane protein 245.
      
 0.611
DBP
D-box binding PAR bZIP transcription factor.
    
 
 0.591
SEC24B
SEC24 homolog B, COPII coat complex component.
    
   0.578
RPUSD3
RNA pseudouridine synthase D3.
      
 0.548
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.