STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YIF1BYip1 interacting factor homolog B, membrane trafficking protein. (309 aa)    
Predicted Functional Partners:
YIPF5
Protein YIPF.
   
 
 0.815
YIPF4
Protein YIPF.
   
 
 0.792
RABAC1
Prenylated Rab acceptor protein 1; General Rab protein regulator required for vesicle formation from the Golgi complex. May control vesicle docking and fusion by mediating the action of Rab GTPases to the SNARE complexes. In addition it inhibits the removal of Rab GTPases from the membrane by GDI1.
   
 
 0.753
SELENOS
Selenoprotein S.
   
 
 0.672
YIPF2
Yip1 domain family member 2.
   
  
 0.658
YIPF1
Protein YIPF.
   
  
 0.653
MAEA
Macrophage erythroblast attacher.
   
 
 0.649
YIPF7
Protein YIPF.
   
 
 0.621
KDELR2
ER lumen protein-retaining receptor.
   
 
 0.602
REEP2
Receptor expression-enhancing protein.
   
  
 0.573
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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