STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THSD1Thrombospondin type 1 domain containing 1. (861 aa)    
Predicted Functional Partners:
EIF2D
Eukaryotic translation initiation factor 2D.
      
 0.645
SMG7
SMG7 nonsense mediated mRNA decay factor.
      
 0.643
CCDC73
Coiled-coil domain containing 73.
      
 0.641
IFT81
Intraflagellar transport 81.
   
  
 0.568
TRIQK
Triple QxxK/R motif containing.
      
 0.520
MPPE1
Metallophosphoesterase 1.
   
  
 0.500
RNASEH1
Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
  
 0.500
DLGAP3
DLG associated protein 3.
  
    0.500
MFSD2B
Major facilitator superfamily domain containing 2B.
      
 0.489
KCNAB2
Potassium voltage-gated channel subfamily A regulatory beta subunit 2.
      
 0.487
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.