STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALX1ALX homeobox 1. (360 aa)    
Predicted Functional Partners:
LRRIQ1
Leucine rich repeats and IQ motif containing 1.
 
  
 
 0.736
LENG1
Leukocyte receptor cluster member 1.
    
 
 0.629
CRAMP1
Cramped chromatin regulator homolog 1.
    
 
 0.610
POLR2J
RNA polymerase II subunit J.
    
 
 0.608
TSPAN19
Tetraspanin.
      
 0.605
JPT2
Jupiter microtubule associated homolog 2.
      
 0.605
MTREX
Mtr4 exosome RNA helicase.
      
 0.599
RASSF9
Ras association domain family member 9.
      
 0.599
NOL11
Nucleolar protein 11.
   
  
 0.595
UGDH
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
      
 0.591
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.