STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL6LHFPL tetraspan subfamily member 6. (217 aa)    
Predicted Functional Partners:
CYTL1
Cytokine like 1.
      
 0.519
RBM33
RNA binding motif protein 33.
      
 0.481
IGBP1
Immunoglobulin binding protein 1.
      
 0.471
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
      
 0.469
MRPS31
Mitochondrial ribosomal protein S31.
      
 0.465
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
      
 0.442
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.