STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL6LHFPL tetraspan subfamily member 6. (217 aa)    
Predicted Functional Partners:
RTL4
Retrotransposon Gag like 4.
   
  
 0.489
FAM174A
Family with sequence similarity 174 member A.
   
  
 0.488
SLCO6A1
Solute carrier organic anion transporter family member.
   
  
 0.485
GLYATL3
Glycine-N-acyltransferase like 3.
      
 0.485
HEATR5B
HEAT repeat containing 5B.
      
 0.483
UBE4B
Ubiquitination factor E4B.
      
 0.483
TTC17
Tetratricopeptide repeat domain 17.
   
  
 0.483
SMIM3
Small integral membrane protein 3.
      
 0.482
LYPLAL1
Lysophospholipase like 1.
      
 0.482
SLC5A9
Solute carrier family 5 member 9; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.477
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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