STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEATR5BHEAT repeat containing 5B. (2070 aa)    
Predicted Functional Partners:
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
   
  
 0.817
AP4E1
Adaptor related protein complex 4 subunit epsilon 1.
   
 
 0.632
TTC17
Tetratricopeptide repeat domain 17.
   
  
 0.588
LYPLAL1
Lysophospholipase like 1.
   
  
 0.525
GLYATL3
Glycine-N-acyltransferase like 3.
      
 0.524
SMIM3
Small integral membrane protein 3.
      
 0.519
FAM174A
Family with sequence similarity 174 member A.
   
  
 0.515
SLC5A9
Solute carrier family 5 member 9; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.515
CLCA2
Chloride channel accessory 2.
      
 0.508
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor.
   
  
 0.501
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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