STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FREM2FRAS1 related extracellular matrix 2. (3168 aa)    
Predicted Functional Partners:
FREM1
FRAS1 related extracellular matrix 1.
   
0.962
FRAS1
Fraser extracellular matrix complex subunit 1.
   
0.933
ITGA8
Integrin subunit alpha 8; Belongs to the integrin alpha chain family.
   
 0.918
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.906
NPNT
Nephronectin.
   
 
 0.825
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.689
ENSCAFP00000054759
Ubiquitin-like domain-containing protein.
   
 
 0.689
ENSCAFP00000061156
Ubiquitin-like domain-containing protein.
   
 
 0.689
GRIP1
Glutamate receptor interacting protein 1.
   
 
 0.641
VPS50
VPS50 subunit of EARP/GARPII complex.
      
 0.598
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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