STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL4A2Collagen type IV alpha 2 chain. (329 aa)    
Predicted Functional Partners:
PELO
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
   
 0.922
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
   
 0.912
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.898
CD44
CD44 antigen.
    
 0.891
GP6
Glycoprotein VI platelet.
     
 0.883
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.871
COL4A1
Collagen type IV alpha 1 chain.
  
0.868
ITGB6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.868
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
    
 0.867
ITGA4
Integrin subunit alpha 4; Belongs to the integrin alpha chain family.
    
 0.858
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.