STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NSD3Nuclear receptor binding SET domain protein 3. (1437 aa)    
Predicted Functional Partners:
BRD4
Bromodomain containing 4.
   
 
 0.953
SMYD3
SET and MYND domain containing 3.
   
 
 0.906
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
 0.887
PLOD1
Fe2OG dioxygenase domain-containing protein.
    
 0.887
BRD3
Bromodomain containing 3.
   
 
 0.872
KMT2E
Lysine methyltransferase 2E.
   
 0.858
ASH1L
ASH1 like histone lysine methyltransferase.
   
 
0.854
SETD7
SET domain containing 7, histone lysine methyltransferase.
   
 0.845
BRD2
Bromodomain-containing protein 2; Binds hyperacetylated chromatin and plays a role in the regulation of transcription, probably by chromatin remodeling. Regulates transcription of the CCND1 gene. Plays a role in nucleosome assembly (By similarity). May play a role in spermatogenesis or folliculogenesis (By similarity).
   
 
 0.827
CBX5
Chromobox 5.
    
 
 0.825
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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