STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOLGA3Golgin A3. (1498 aa)    
Predicted Functional Partners:
SAMD4B
Sterile alpha motif domain containing 4B.
   
  
 0.735
TSNAX
Uncharacterized protein.
    
 
 0.721
DPP7
Dipeptidyl peptidase 7.
      
 0.714
TMEM63C
Transmembrane protein 63C.
   
 
 0.709
PICK1
Protein interacting with PRKCA 1.
      
 0.671
TRAPPC8
Trafficking protein particle complex 8.
   
 
 0.669
MEA1
Male-enhanced antigen 1.
      
 0.615
CHFR
Checkpoint with forkhead and ring finger domains.
  
   
 0.603
RNPC3
RNA binding region (RNP1, RRM) containing 3.
   
  
 0.597
IST1
IST1 factor associated with ESCRT-III.
    
 
 0.589
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.