STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDHGA1Protocadherin gamma subfamily A, 1. (818 aa)    
Predicted Functional Partners:
SH3BP5L
SH3 binding domain protein 5 like.
      
 0.515
CLSTN3
Calsyntenin 3.
      
 0.479
RADIL
Rap associating with DIL domain.
   
 
 0.475
C24H20orf194
Chromosome 24 C20orf194 homolog.
      
 0.461
GIGYF2
GRB10 interacting GYF protein 2.
      
 0.461
PITPNC1
Phosphatidylinositol transfer protein cytoplasmic 1.
      
 0.461
MYNN
Myoneurin.
      
 0.459
LRRC34
Leucine rich repeat containing 34.
      
 0.457
GPR87
G protein-coupled receptor 87; Belongs to the G-protein coupled receptor 1 family.
      
 0.456
TELO2
Telomere maintenance 2.
    
 
 0.423
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.