LSM1 protein (Canis lupus familiaris) - STRING interaction network

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LSM1

U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. (133 aa)

Predicted Functional Partners:

LSM6

0.998

LSM7

0.997

LSM5

0.988

LSM2

0.987

DDX6

0.984

PATL1

0.975

XRN1

0.966

LSM4

0.955

LSM4-2

0.954

LSM3

0.946

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX6	LSM1	ENSCAFP00000018313	ENSCAFP00000009190	DEAD-box helicase 6; Belongs to the DEAD box helicase family.	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	0.984
DDX6	LSM2	ENSCAFP00000018313	ENSCAFP00000066531	DEAD-box helicase 6; Belongs to the DEAD box helicase family.	Sm domain-containing protein.	0.749
DDX6	LSM3	ENSCAFP00000018313	ENSCAFP00000050059	DEAD-box helicase 6; Belongs to the DEAD box helicase family.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.606
DDX6	LSM4	ENSCAFP00000018313	ENSCAFP00000021959	DEAD-box helicase 6; Belongs to the DEAD box helicase family.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.804
DDX6	LSM4-2	ENSCAFP00000018313	ENSCAFP00000061431	DEAD-box helicase 6; Belongs to the DEAD box helicase family.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.803
DDX6	LSM5	ENSCAFP00000018313	ENSCAFP00000057751	DEAD-box helicase 6; Belongs to the DEAD box helicase family.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.531
DDX6	LSM6	ENSCAFP00000018313	ENSCAFP00000046724	DEAD-box helicase 6; Belongs to the DEAD box helicase family.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.643
DDX6	LSM7	ENSCAFP00000018313	ENSCAFP00000028692	DEAD-box helicase 6; Belongs to the DEAD box helicase family.	Sm domain-containing protein.	0.982
DDX6	PATL1	ENSCAFP00000018313	ENSCAFP00000011255	DEAD-box helicase 6; Belongs to the DEAD box helicase family.	PAT1 homolog 1, processing body mRNA decay factor.	0.946
DDX6	XRN1	ENSCAFP00000018313	ENSCAFP00000051235	DEAD-box helicase 6; Belongs to the DEAD box helicase family.	5'-3' exoribonuclease 1.	0.733
LSM1	DDX6	ENSCAFP00000009190	ENSCAFP00000018313	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	DEAD-box helicase 6; Belongs to the DEAD box helicase family.	0.984
LSM1	LSM2	ENSCAFP00000009190	ENSCAFP00000066531	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	Sm domain-containing protein.	0.987
LSM1	LSM3	ENSCAFP00000009190	ENSCAFP00000050059	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.946
LSM1	LSM4	ENSCAFP00000009190	ENSCAFP00000021959	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.955
LSM1	LSM4-2	ENSCAFP00000009190	ENSCAFP00000061431	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.954
LSM1	LSM5	ENSCAFP00000009190	ENSCAFP00000057751	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.988
LSM1	LSM6	ENSCAFP00000009190	ENSCAFP00000046724	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.998
LSM1	LSM7	ENSCAFP00000009190	ENSCAFP00000028692	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	Sm domain-containing protein.	0.997
LSM1	PATL1	ENSCAFP00000009190	ENSCAFP00000011255	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	PAT1 homolog 1, processing body mRNA decay factor.	0.975
LSM1	XRN1	ENSCAFP00000009190	ENSCAFP00000051235	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	5'-3' exoribonuclease 1.	0.966

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