STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KERAKeratocan. (350 aa)    
Predicted Functional Partners:
LOC489707
Sulfotransferase; Belongs to the sulfotransferase 1 family.
     
 0.841
ALDH3A1
Aldehyde dehydrogenase, dimeric NADP-preferring; ALDHs play a major role in the detoxification of alcohol- derived acetaldehyde (Probable). They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation (Probable). Oxidizes medium and long chain aldehydes into non-toxic fatty acids (By similarity). Preferentially oxidizes aromatic aldehyde substrates (By similarity). Comprises about 50 percent of corneal epithelial soluble proteins (By similarity). May play a role in preventing corneal damage caused by ultraviolet light (By similarity).
    
 0.835
BLMH
Bleomycin hydrolase; Belongs to the peptidase C1 family.
   
   0.825
LRR1
Leucine rich repeat protein 1.
  
   
 0.794
NUDT12
Nudix hydrolase 12.
    
 0.779
KRT12
Keratin 12; Belongs to the intermediate filament family.
    
 0.703
OGN
Osteoglycin.
   
 
0.686
CHST3
Sulfotransferase; Belongs to the sulfotransferase 1 family.
     
 0.649
ARMC9
Armadillo repeat containing 9.
      
 0.642
LUM
Lumican.
  
 
0.628
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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