Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DOK2 | GDNF | ENSCAFP00000014749 | ENSCAFP00000042228 | Docking protein 2. | Glial cell derived neurotrophic factor. | 0.509 |
DOK2 | GFRA4 | ENSCAFP00000014749 | ENSCAFP00000009362 | Docking protein 2. | GDNF family receptor alpha 4. | 0.501 |
DOK2 | NRTN | ENSCAFP00000014749 | ENSCAFP00000027666 | Docking protein 2. | Neurturin. | 0.501 |
DOK2 | PSPN | ENSCAFP00000014749 | ENSCAFP00000027575 | Docking protein 2. | Persephin. | 0.513 |
DOK2 | RET | ENSCAFP00000014749 | ENSCAFP00000046537 | Docking protein 2. | Ret proto-oncogene; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.579 |
GAB1 | GDNF | ENSCAFP00000005384 | ENSCAFP00000042228 | GRB2 associated binding protein 1. | Glial cell derived neurotrophic factor. | 0.499 |
GAB1 | GFRA4 | ENSCAFP00000005384 | ENSCAFP00000009362 | GRB2 associated binding protein 1. | GDNF family receptor alpha 4. | 0.499 |
GAB1 | NRTN | ENSCAFP00000005384 | ENSCAFP00000027666 | GRB2 associated binding protein 1. | Neurturin. | 0.542 |
GAB1 | PIK3CB | ENSCAFP00000005384 | ENSCAFP00000011245 | GRB2 associated binding protein 1. | Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta; Belongs to the PI3/PI4-kinase family. | 0.914 |
GAB1 | PIK3R1 | ENSCAFP00000005384 | ENSCAFP00000011322 | GRB2 associated binding protein 1. | Phosphoinositide-3-kinase regulatory subunit 1. | 0.978 |
GAB1 | PSPN | ENSCAFP00000005384 | ENSCAFP00000027575 | GRB2 associated binding protein 1. | Persephin. | 0.542 |
GAB1 | RET | ENSCAFP00000005384 | ENSCAFP00000046537 | GRB2 associated binding protein 1. | Ret proto-oncogene; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.553 |
GAB1 | SRC | ENSCAFP00000005384 | ENSCAFP00000044994 | GRB2 associated binding protein 1. | Tyrosine-protein kinase. | 0.698 |
GDNF | DOK2 | ENSCAFP00000042228 | ENSCAFP00000014749 | Glial cell derived neurotrophic factor. | Docking protein 2. | 0.509 |
GDNF | GAB1 | ENSCAFP00000042228 | ENSCAFP00000005384 | Glial cell derived neurotrophic factor. | GRB2 associated binding protein 1. | 0.499 |
GDNF | GFRA4 | ENSCAFP00000042228 | ENSCAFP00000009362 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha 4. | 0.661 |
GDNF | GRB10 | ENSCAFP00000042228 | ENSCAFP00000005101 | Glial cell derived neurotrophic factor. | Growth factor receptor bound protein 10. | 0.499 |
GDNF | NRTN | ENSCAFP00000042228 | ENSCAFP00000027666 | Glial cell derived neurotrophic factor. | Neurturin. | 0.714 |
GDNF | PIK3CB | ENSCAFP00000042228 | ENSCAFP00000011245 | Glial cell derived neurotrophic factor. | Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta; Belongs to the PI3/PI4-kinase family. | 0.514 |
GDNF | PIK3R1 | ENSCAFP00000042228 | ENSCAFP00000011322 | Glial cell derived neurotrophic factor. | Phosphoinositide-3-kinase regulatory subunit 1. | 0.499 |
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