STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM34Uncharacterized protein. (487 aa)    
Predicted Functional Partners:
OR52B6
Olfactory receptor.
      
 0.827
TRIM33
Tripartite motif containing 33.
    
 
 0.609
ZWINT
ZW10 interacting kinetochore protein.
    
 
 0.602
TRIM37
Tripartite motif containing 37.
    
 
 0.594
CPSF6
Cleavage and polyadenylation specific factor 6.
    
 
 0.568
SLC26A3
Chloride anion exchanger; Chloride/bicarbonate exchanger. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
      
 0.533
NLRP6
NLR family pyrin domain containing 6.
    
 0.449
DTNBP1
Dystrobrevin binding protein 1.
    
 
 0.443
UBE2W
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.439
TRIM54
Tripartite motif containing 54.
    
 
 0.430
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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