STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM34Uncharacterized protein. (487 aa)    
Predicted Functional Partners:
OR52B6
Olfactory receptor.
      
 0.855
CMTR1
Cap methyltransferase 1.
   
   0.806
TRIM33
Tripartite motif containing 33.
    
 
 0.587
CPSF6
Cleavage and polyadenylation specific factor 6.
    
 
 0.582
TRIM37
Tripartite motif containing 37.
    
 
 0.577
ILK
Integrin linked kinase.
    
 
 0.528
COL17A1
120 kDa linear IgA disease antigen homolog; The 120 kDa linear IgA disease antigen homolog is an anchoring filament component involved in dermal-epidermal cohesion.
    
 
 0.524
FERMT1
Fermitin family member 1.
      
 0.515
TRIM54
Tripartite motif containing 54.
    
 
 0.496
SPINK4
Serine peptidase inhibitor, Kazal type 4.
      
 0.483
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.