STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX51DEAD-box helicase 51; Belongs to the DEAD box helicase family. (631 aa)    
Predicted Functional Partners:
RRP8
Ribosomal RNA processing 8.
   
 
 0.797
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 
 0.773
PUM3
Pumilio RNA binding family member 3.
   
 
 0.705
UTP18
UTP18 small subunit processome component.
   
 
 0.697
WDR36
WD repeat domain 36.
   
 
 0.688
NOL10
Nucleolar protein 10.
   
 
 0.675
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family.
   
 
 0.655
WDR12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.652
PDCD11
Programmed cell death 11.
   
 
 0.644
DHX32
DEAH-box helicase 32 (putative).
   
 
 0.641
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.