STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF5Protein YIPF. (257 aa)    
Predicted Functional Partners:
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
   
 
 0.848
YIPF2
Yip1 domain family member 2.
   
 
 0.779
YIPF1
Protein YIPF.
   
 
 0.704
YIF1A
Yip1 interacting factor homolog A, membrane trafficking protein.
   
 
 0.671
YIPF3
Yip1 domain family member 3.
   
 
 0.585
LDHD
Lactate dehydrogenase D.
 
    
 0.584
DERL1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
 
 0.563
SYVN1
Synoviolin 1.
   
 
 0.549
SAMM50
SAMM50 sorting and assembly machinery component.
 
 
    0.535
COG5
Component of oligomeric golgi complex 5.
   
  
 0.531
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.