STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUT10Alpha-(1,3)-fucosyltransferase 10; Probable fucosyltransferase. (478 aa)    
Predicted Functional Partners:
PIGG
Phosphatidylinositol glycan anchor biosynthesis class G.
      
 0.888
TMEM161B
Transmembrane protein 161B.
      
 0.883
CHRNA6
Cholinergic receptor nicotinic alpha 6 subunit.
      
 0.829
PSD3
Pleckstrin and Sec7 domain containing 3.
      
 0.829
VPS13A
Vacuolar protein sorting 13 homolog A.
      
 0.826
DOCK8
Dedicator of cytokinesis 8; Belongs to the DOCK family.
   
  
 0.813
LPAR1
Lysophosphatidic acid receptor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.811
DDX4
DEAD-box helicase 4; Belongs to the DEAD box helicase family.
   
  
 0.801
GGPS1
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
      
 0.693
ST3GAL6
ST3 beta-galactoside alpha-2,3-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
     
 0.567
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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