STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C24H20orf194Chromosome 24 C20orf194 homolog. (1177 aa)    
Predicted Functional Partners:
C6H16orf71
Chromosome 6 C16orf71 homolog.
      
 0.707
OXT
Oxytocin/neurophysin I prepropeptide; Belongs to the vasopressin/oxytocin family.
      
 0.698
SLC4A11
Solute carrier family 4 member 11.
      
 0.690
ARPC2
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
      
 0.690
C24H20orf173
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.596
RNF24
Ring finger protein 24.
      
 0.592
SIGLEC1
Sialic acid binding Ig like lectin 1.
      
 0.592
TTBK1
Tau tubulin kinase 1.
      
 0.527
NRIP2
Nuclear receptor interacting protein 2.
      
 0.518
VPS26A
VPS26, retromer complex component A.
      
 0.478
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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