STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC4A11Solute carrier family 4 member 11. (930 aa)    
Predicted Functional Partners:
COL8A2
Collagen type VIII alpha 2 chain.
      
 0.915
CYYR1
Cysteine and tyrosine rich 1.
      
 0.812
RBBP9
RB binding protein 9, serine hydrolase.
      
 0.790
LOXHD1
Lipoxygenase homology domains 1.
      
 0.786
AGBL1
ATP/GTP binding protein like 1.
      
 0.712
C24H20orf194
Chromosome 24 C20orf194 homolog.
      
 0.690
ZNF133
Zinc finger protein 133.
      
 0.610
ATP6V1C2
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
      
 0.604
ZEB1
Zinc finger E-box binding homeobox 1.
      
 0.580
KANK4
KN motif and ankyrin repeat domains 4.
    
 
 0.558
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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