STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCGB1C1Uncharacterized protein. (95 aa)    
Predicted Functional Partners:
CPA4
Carboxypeptidase A4.
   
  
 0.877
KANK2
KN motif and ankyrin repeat domains 2.
      
 0.816
CPA1
Carboxypeptidase A1.
   
  
 0.716
MTIF3
Mitochondrial translational initiation factor 3.
      
 0.573
INSM2
INSM transcriptional repressor 2.
      
 0.501
TSPAN7
Tetraspanin.
      
 0.487
SUMO2
Small ubiquitin-related modifier.
      
 0.483
GLI1
GLI family zinc finger 1.
      
 0.459
TMEM72
Transmembrane protein 72.
      
 0.457
PCDH11X
Uncharacterized protein.
      
 0.440
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.