STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLAC8L1PLAC8 like 1. (170 aa)    
Predicted Functional Partners:
FAM172A
Family with sequence similarity 172 member A.
      
 0.891
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
      
 0.693
PCYOX1
Prenylcysteine oxidase 1.
   
 
 0.673
TDRD3
Tudor domain containing 3.
      
 0.644
PRDM10
PR/SET domain 10.
    
 
 0.525
ANAPC7
Anaphase promoting complex subunit 7.
      
 0.523
CCNL2
Cyclin L2; Belongs to the cyclin family.
      
 0.523
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 
 0.506
DDX24
DEAD-box helicase 24.
    
 
 0.495
DCC
DCC netrin 1 receptor.
    
 
 0.468
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.