STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLAC8L1PLAC8 like 1. (170 aa)    
Predicted Functional Partners:
FAM172A
Family with sequence similarity 172 member A.
      
 0.870
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
      
 0.650
PRDM10
PR/SET domain 10.
    
 0.605
RNPC3
RNA binding region (RNP1, RRM) containing 3.
    
 
 0.576
PCYOX1
Prenylcysteine oxidase 1.
    
 
 0.526
NCOA2
Nuclear receptor coactivator 2.
    
 0.483
DCC
DCC netrin 1 receptor.
    
 
 0.472
ANAPC7
Anaphase promoting complex subunit 7.
      
 0.469
COL22A1
Collagen type XXII alpha 1 chain.
    
 
 0.462
SLITRK1
SLIT and NTRK like family member 1.
    
 
 0.445
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.