STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM3Tripartite motif containing 3. (744 aa)    
Predicted Functional Partners:
J9NRL4_CANLF
RING-type domain-containing protein.
   
   0.834
ACTN4
Actinin alpha 4.
   
 
 0.713
ACTN1
Actinin alpha 1.
   
 
 0.713
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 
 0.700
MYO5A
Myosin VA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.671
ANKK1
Ankyrin repeat and kinase domain containing 1.
    
 0.616
LRRC8E
Leucine rich repeat containing 8 VRAC subunit E.
    
 0.614
FBP2
Fructose-bisphosphatase 2; Belongs to the FBPase class 1 family.
   
 
 0.613
TRIM44
Tripartite motif containing 44.
    
 
 0.610
SLC13A4
Solute carrier family 13 member 4.
   
  
 0.599
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.