STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THUMPD2THUMP domain containing 2. (502 aa)    
Predicted Functional Partners:
RSBN1
Round spermatid basic protein 1.
      
 0.854
RBM27
Uncharacterized protein.
      
 0.852
STAM2
Signal transducing adaptor molecule 2.
      
 0.840
SCAF4
SR-related CTD associated factor 4.
      
 0.837
SECISBP2L
SECIS binding protein 2 like.
      
 0.817
SP140
SP140 nuclear body protein.
      
 0.811
FAM118A
Family with sequence similarity 118 member A.
      
 0.738
DEK
DEK proto-oncogene.
      
 0.718
TRMT11
tRNA methyltransferase 11 homolog.
   
 
 0.609
NUS1
NUS1 dehydrodolichyl diphosphate synthase subunit.
   
    0.586
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.