STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRP8Ribosomal RNA processing 8. (664 aa)    
Predicted Functional Partners:
RBM28
RNA binding motif protein 28.
   
 
 0.949
BYSL
Bystin like.
   
 
 0.942
RPF2
Ribosome production factor 2 homolog.
   
   0.941
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
   0.933
CEBPZ
CCAAT enhancer binding protein zeta.
   
   0.932
PUM3
Pumilio RNA binding family member 3.
   
 
 0.931
BRIX1
Biogenesis of ribosomes BRX1.
   
 
 0.928
UTP23
UTP23 small subunit processome component.
   
  
 0.920
EBNA1BP2
EBNA1 binding protein 2.
   
   0.920
RBM34
RNA binding motif protein 34.
   
   0.919
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.