STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMOD3Leiomodin 3. (620 aa)    
Predicted Functional Partners:
KLHL40
Kelch like family member 40.
   
 
 0.855
KBTBD13
Kelch repeat and BTB domain containing 13.
   
  
 0.730
TNNT1
Troponin T1, slow skeletal type.
   
  
 0.678
MYOZ2
Myozenin 2.
   
  
 0.614
KLHL41
Kelch like family member 41.
   
 
 0.598
TMEM182
Transmembrane protein 182.
   
  
 0.570
NEB
Nebulin.
   
 
 0.564
CSRP3
Cysteine and glycine rich protein 3.
   
  
 0.541
CFL2
Cofilin 2; Belongs to the actin-binding proteins ADF family.
   
  
 0.537
TNNI2
Troponin I2, fast skeletal type.
   
  
 0.531
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.