STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMF1TATA element modulatory factor 1. (1058 aa)    
Predicted Functional Partners:
VPS53
VPS53 subunit of GARP complex.
      
 0.655
CENPW
Centromere protein W.
      
 0.655
VPS51
VPS51 subunit of GARP complex.
      
 0.631
CYBB
Cytochrome b-245 beta chain.
      
 0.621
RPS15A
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
      
 0.609
F1PAS4_CANLF
Uncharacterized protein.
    
   0.584
ATP5ME
Uncharacterized protein.
    
   0.584
POC1A
POC1 centriolar protein A.
      
 0.583
ARFRP1
ADP ribosylation factor related protein 1; Belongs to the small GTPase superfamily. Arf family.
      
 0.582
TRIP12
Thyroid hormone receptor interactor 12.
      
 0.581
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.