STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPA1Uncharacterized protein. (373 aa)    
Predicted Functional Partners:
PTBP1
Polypyrimidine tract binding protein 1.
   
 0.922
SRSF1
Serine and arginine rich splicing factor 1.
   
 0.816
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
  
0.801
HNRNPF
Heterogeneous nuclear ribonucleoprotein F.
   
 0.796
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.777
HNRNPC-2
RRM domain-containing protein.
   
 0.769
ENSCAFP00000065692
Uncharacterized protein.
   
 0.762
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.753
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 0.740
MATR3
Uncharacterized protein.
   
 
 0.729
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.