Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EBF4EBF family member 4. (602 aa)    
Predicted Functional Partners:
ELAVL3
ELAV-like protein; Belongs to the RRM elav family.
   
  
 0.522
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.507
SCD
Stearoyl-CoA desaturase; Belongs to the fatty acid desaturase type 1 family.
   
 
 0.503
SCD5
Stearoyl-CoA desaturase 5; Belongs to the fatty acid desaturase type 1 family.
   
 
 0.503
YOD1
YOD1 deubiquitinase.
    
   0.451
PLAA
Phospholipase A2 activating protein.
    
   0.451
ELAVL2
ELAV-like protein; Belongs to the RRM elav family.
   
  
 0.429
ZBED2
Zinc finger BED-type containing 2.
      
 0.426
MSS51
MSS51 mitochondrial translational activator.
      
 0.426
FAAP100
FA core complex associated protein 100.
    
 
 0.413
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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