STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC10Homeobox C13. (342 aa)    
Predicted Functional Partners:
HOXD9
Homeobox domain-containing protein.
   
 
0.806
TBX4
T-box transcription factor TBX4; Involved in the transcriptional regulation of genes required for mesoderm differentiation. Probably plays a role in limb pattern formation (By similarity).
    
 
 0.650
TIGD4
Tigger transposable element derived 4.
      
 0.636
FOXN1
Forkhead box N1.
   
 
 0.586
HOXC6
Homeobox C6.
   
 
0.582
HOXC4
Homeobox C4.
   
 
0.571
HOXB7
Homeobox B7.
   
 
0.532
TCHH
Uncharacterized protein.
      
 0.506
EBNA1BP2
EBNA1 binding protein 2.
      
 0.493
ZSWIM2
Zinc finger SWIM-type containing 2.
      
 0.493
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.