STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC11Homeobox C11. (305 aa)    
Predicted Functional Partners:
RNPEPL1
Arginyl aminopeptidase like 1.
      
 0.648
MAP3K6
Mitogen-activated protein kinase kinase kinase 6.
      
 0.646
CLYBL
Citrate lyase beta like.
      
 0.589
ATP6V1H
ATPase H+ transporting V1 subunit H.
      
 0.562
ASPRV1
Aspartic peptidase retroviral like 1.
      
 0.487
EYA1
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
    
 
 0.485
WDR81
WD repeat domain 81.
      
 0.482
HOXB7
Homeobox B7.
   
 
0.470
HOXD10
Homeobox D10.
   
  
0.466
MRPL35
Mitochondrial ribosomal protein L35.
      
 0.463
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.