STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI1Exoribonuclease 1. (349 aa)    
Predicted Functional Partners:
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
   
  
 0.846
RBM6
RNA binding motif protein 6.
   
  
 0.814
SLBP
Stem-loop binding protein.
    
 
 0.813
SLBP2
SLBP_RNA_bind domain-containing protein.
    
 
 0.813
NUDCD1
NudC domain containing 1.
    
   0.769
WDR83
WD repeat domain 83.
   
  
 0.735
DICER1
Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily.
    
 
 0.735
ANO9
Anoctamin.
      
 0.726
SEPSECS
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
    
 
 0.694
ANKLE1
Ankyrin repeat and LEM domain containing 1.
      
 0.694
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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