STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC46A3Solute carrier family 46 member 3. (461 aa)    
Predicted Functional Partners:
CPPED1
Calcineurin like phosphoesterase domain containing 1.
   
  
 0.756
PITRM1
Pitrilysin metallopeptidase 1.
      
 0.712
RNF213
Ring finger protein 213.
   
  
 0.610
SLC39A1
Solute carrier family 39 member 1.
      
 0.577
SLC16A3
Solute carrier family 16 member 3.
   
  
 0.573
SLC45A4
Solute carrier family 45 member 4.
   
  
 0.514
NT5E
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
   
  
 0.504
GMFG
Glia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily.
   
  
 0.496
SIDT2
SID1 transmembrane family member 2.
   
  
 0.490
SLC18A1
Solute carrier family 18 member A1.
   
  
 0.488
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.