STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO2A1Solute carrier organic anion transporter family member. (644 aa)    
Predicted Functional Partners:
SLC16A5
Solute carrier family 16 member 5.
   
 
 0.630
SLC22A18
Solute carrier family 22 member 18.
   
  
 0.603
PLPP7
Phospholipid phosphatase 7 (inactive).
   
  
 0.595
RNF113A
Uncharacterized protein.
      
 0.592
LRATD1
LRAT domain containing 1.
      
 0.591
ZNF358
Zinc finger protein 358.
      
 0.591
FEM1A
Fem-1 homolog A.
      
 0.591
COL8A2
Collagen type VIII alpha 2 chain.
      
 0.536
DUSP15
Dual specificity phosphatase 15; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.532
HPGD
15-hydroxyprostaglandin dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.511
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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