STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCMTD1Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1. (356 aa)    
Predicted Functional Partners:
PXDNL
Peroxidasin like.
 
    
 0.807
CCDC42
Coiled-coil domain containing 42.
      
 0.724
ZNF384
Zinc finger protein 384.
      
 0.707
SLC25A32
Solute carrier family 25 member 32; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.704
PUS7
Pseudouridine synthase 7.
     
 0.696
ARHGEF10
Rho guanine nucleotide exchange factor 10.
      
 0.681
SCAF11
SR-related CTD associated factor 11.
   
  
 0.657
BRSK2
BR serine/threonine kinase 2.
      
 0.651
CNIH3
Cornichon family AMPA receptor auxiliary protein 3.
      
 0.648
SOWAHB
Sosondowah ankyrin repeat domain family member B.
      
 0.566
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.